HowToBuild

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== Starting a Fresh Developer's Build ==
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When building FARSIGHT for the first time you will need to set up a development environment. FARSIGHT utilizes several large source libraries so ensure that you have at least 25 GiB of HDD space.
When building FARSIGHT for the first time you will need to set up a development environment. FARSIGHT utilizes several large source libraries so ensure that you have at least 25 GiB of HDD space.  
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=== Choose a Compiler For Your OS ===
 
=== Choose a Compiler For Your OS ===
 
Popular choices are gcc/g++ on Linux, Microsoft Visual Studio 2008/2010 on Windows, and XCode* on Mac OS X.   
 
Popular choices are gcc/g++ on Linux, Microsoft Visual Studio 2008/2010 on Windows, and XCode* on Mac OS X.   
  
<span style="font-size:75%">*To install XCode/gcc on Mac OS X you may need to install the XCode development environment. This software should be available on your OS reinstall/recovery disk. At this time only XCode 3.2 is supported as CMake still does not generate appropriate project files for XCode 4</span>
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<span style="font-size:75%">*To install XCode/gcc on Mac OS X you may need to install the XCode development environment.</span>
  
 
=== Install CMake ===
 
=== Install CMake ===
  
CMake is a tool which generates the makefiles under Linux, the Visual Studio Solution files (.sln) under Windows, or the XCode project files (.xcodeproj) under Mac OS X. It aims to allow developers to build their projects across different platforms with a minimum of reconfiguration.
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[http://cmake.org/cmake/resources/software.html CMake] is a tool which generates the makefiles under Linux, the Visual Studio Solution files (.sln) under Windows, or the XCode project files (.xcodeproj) under Mac OS X. It aims to allow developers to build their projects across different platforms with a minimum of reconfiguration.
  
<span style="font-size:100%; color:red">Note: If you want to take advantage of multicore building in Visual Studio, you can append /MP'''n''', where '''n''' is the number of processors you have. (ie. /MP16 for the Dell T5500 Workstations in the lab) to CMAKE_C_FLAGS and CMAKE_CXX_FLAGS at each CMake configuration screen.</span>
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<span style="font-size:125%; color:red">Note: If you want to take advantage of multicore building in Visual Studio, you can append /MP to CMAKE_C_FLAGS and CMAKE_CXX_FLAGS at each CMake configuration screen.</span>
  
To check the number of processors your computer has, call up the command prompt, type <tt>"echo NUMBER_OF_PROCESSORS"</tt>, and the next line will result in a number.  Using a number greater than the number of processors you have will seriously slow down the computer.
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=== Install Git ===
  
=== Build or install Qt ===
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# Download [[http://git-scm.com/ Git]]. [[Image:downloadGIT.jpg|center|frame|[http://git-scm.com/ Download Git]]]
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# When it ask for "Adjusting your PATH environment: How would you like to use Git from the command line", select: <tt>Run Git from the Windows Command Prompt</tt>.
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# When it ask for "Configuring the line ending conversions: How should Git treat line endings in text files", select: <tt>Checkout Windows-style, commit Unix-style line endings</tt>.
  
# Build Qt from source.  Download it from here: [http://get.qt.nokia.com/qt/source/qt-everywhere-opensource-src-4.7.3.zip Windows Qt source code]. [http://get.qt.nokia.com/qt/source/qt-everywhere-opensource-src-4.7.3.tar.gz Linux/Mac Qt source code].
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<center>[[Image:GITsetup.jpg|Make sure the 2nd option is selected.]][[Image:GITsetup2.jpg|Make sure the 1st option is selected.]]</center>
# Extract the zip file to the directory of your choosing.
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# If you want to take advantage of multicore building QT, simply open up <QT root directory>\mkspecs\win32-msvc2008\qmake.conf and add -MP16 to the end of QMAKE_CFLAGS
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[[Image:QTmulticore.jpg|center|frame|none|alt=alt text|Multicore building QT (-MP16 represents 16 processors)]]
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For Visual Studio 2008/2010:
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# Go to Start->All Programs->Microsoft Visual Studio 2008->Visual Studio Tools->Visual Studio 2008 x64 Win64 Command Prompt
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# cd to the directory where you unzipped the QT source (Shortcut key: tab) [[Image:changeDrive.jpg|center|frame|alt=alt text|Go to the QT root directory in the Visual Studio 2008 x64 Win64 command prompt.]]
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# Run <tt>"configure"</tt> (see figure below) <span style="color:blue">(This should take about 5 minutes or more. [http://slashdot.org/ Reading material as you wait.])</span> <center>[[Image:QTacceptlicense.jpg|Configure]] [[Image:QTconfiguredone2.jpg|Configuring done, now nmake]] [[Image: QTnmakefinish.jpg|The command prompt should look like this after nmake completes.]]</center>
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# Run <tt>"nmake"</tt> <span style="color:blue">[http://en.wikipedia.org/wiki/Coffee Take a coffee break.]</span> This step will take at least 30 minutes.
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*If you made a mistake somewhere, you can start from scratch by typing <tt>"nmake confclean"</tt>
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=== Download Boost ===
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Download the Boost C++ libraries from [http://sourceforge.net/projects/boost/files/boost/1.47.0/ the Boost download page].  Make sure you download the actual source file and not the documentation (The documentation will have pdf in its name.)
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[[Image: boostDownload.jpg|center]]
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Unzip it to a directory of your choosing. 
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You '''do not''' need to compile it.
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=== Install Subversion ===
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SVN is a version control system used to manage the source code.  
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[http://tortoisesvn.net/ TortoiseSVN x64]Is a popular choice for Windows that integrates into the OS.
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Use [http://www.sliksvn.com/en/download SilkSVN] for the SuperBuild.
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Additional source libraries require [http://git-scm.com/ GIT]
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[[Image:TortoiseSVN.jpg|center|Install TortoiseSVN]]
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=== Download FARSIGHT source code ===
 
=== Download FARSIGHT source code ===
You can check out a copy of FARSIGHT from the following location:
 
 
NEW SVN Repository is located at:
 
https://farsight-svn.ee.uh.edu/repos/farsight/
 
 
For all new users, it is recommended that you checkout branches/ITKv4Merge as we are on the verge of merging ITKv4Merge into trunk and want all new development to happen in that branch in the meantime.
 
 
[[Image:svncheckoutFarsight.jpg|center|frame|SVN Checkout Farsight to the desired folder.]]
 
 
The old Repository is locked to changes as of 2/17/2011
 
svn://www.openworld.rpi.edu/repos/farsight
 
 
The actual source code is in the "trunk" subdirectory.  If you're not interested in downloading test data or branch versions, you can download only the source code by appending "/trunk" to the above path.
 
 
https://farsight-svn.ee.uh.edu/repos/farsight/ /trunk
 
 
[[Image:DownloadFarsightfinish.jpg‎|center|TortoiseSVN]]
 
 
After all libraries and source codes have been downloaded, continue with the instructions below:
 
 
== SuperBuild Instructions ==
 
Superbuild has been deprecated.
 
 
== Manual Source Libraries Configuration ==
 
 
=== Build VXL ===
 
 
# Download the latest stable release of VXL from [http://vxl.sourceforge.net/ Vision-something-Libraries]. [[Image:downloadVXL.jpg|center|frame|[http://vxl.sourceforge.net/ VXL download page]]]
 
# Unzip the file.
 
# Run CMake.
 
# Specify the source folder and binary folder.
 
# <tt>Configure</tt>
 
# Specify the generator for this project: <tt>Visual Studio 9 2008 Win64</tt>
 
# (optional) For speed optimization in Visual Studio, append <tt>/MP16</tt> to CMAKE_C_FLAGS and CMAKE_CXX_FLAGS as shown in the figure to the right. [[Image: CmakeVXLmulticore.jpg|right|thumb|Multicore building VXL]]
 
# Turn the following options OFF:
 
#*BUILD_BRL
 
#*BUILD_CONVERSIONS
 
#*BUILD_EXAMPLES
 
#*BUILD_GEL
 
#*BUILD_OUL
 
#*BUILD_OXL
 
#*BUILD_PRIP
 
#*BUILD_TBL
 
#*BUILD_TESTING [[Image: cmakevxl.jpg|right|thumb|CMake VXL]]
 
# Turn the following options ON:
 
#*BUILD_RPL_RGTL
 
# Click <tt>configure</tt> and then turn the following option ON:
 
#*BUILD_RPL_RTVL (will show up in pink)
 
# <tt>Configure</tt> again and then <tt>Generate</tt>
 
# Go to the VXL binary folder and open the solution file (vxl.sln).
 
# Go to the main menu bar: Build->Batch Build
 
# Turn ON the following options under ALL_BUILD:
 
#*Debug|x64
 
#*Release|x64 [[Image: batchbuildvxl.jpg|center|frame|Batch Build VXL]]
 
#<tt>Build</tt>
 
# As you wait, [http://webdevrefinery.com/forums/topic/9459-funniest-programming-comics/ play some Starcraft 2.]
 
 
=== Build ITKv4 ===
 
 
Windows 7:
 
 
If you want ITK to be saved in C:\Lab\
 
 
In Git Bash shell (Start -> Git Bash in search box)
 
 
Replace "/c/Lab" with your desired directory.
 
''cd /c/Lab''
 
 
 
 
To checkout v4.0a7:
 
''git clone git://itk.org/ITK.git''
 
''cd ITK''
 
''git checkout v4.0a09''
 
''git submodule update''
 
 
[[File:GITITK.jpg|center|ITK]]
 
 
# <tt>Configure</tt>
 
# Specify the generator for this project: <tt>Visual Studio 9 2008 Win64</tt>
 
# An error will show up in the CMake log complaining about BUILD_TESTING being on.
 
# (optional) For speed optimization in Visual Studio, append <tt>/MP16</tt> to CMAKE_C_FLAGS and CMAKE_CXX_FLAGS as shown in the figure to the right. [[Image:ITKcmake.jpg|right|thumb|alt=alt text|Multicore building ITKv4. <span style="font-size:100%; color:red">Make sure you change the number according to the number of processors you have! (ie. /MP8)</span> ]]
 
# Turn OFF the following:
 
#* BUILD_TESTING
 
#* BUILD_EXAMPLES
 
# <tt>Configure</tt> again.
 
# Turn ON the following:
 
#* ITKGroup_* or ITK_BUILD_ALL_MODULES
 
#* ITK_USE_64BITS_IDS
 
#* ITK_USE_REVIEW
 
#**'''Do NOT turn on ITK_USE_SYSTEM_VXL as documented in the old FARSIGHT_HowToBuild guide'''
 
# <tt>Configure</tt> again and then <tt>Generate</tt>
 
# Go to the ITK binary folder and open the solution file (ITK.sln).
 
# Go to the file toolbar: Build->Batch Build [[Image: batchbuildvxl.jpg|right|thumb|alt=alt text|Batch Build ITK]]
 
# Turn ON the following options under ALL_BUILD:
 
#*Debug|x64
 
#*Release|x64
 
#<tt>Build</tt>
 
# As you wait, [http://xkcd.com/303/ poke your neighbor.]
 
 
 
CMakeList files may need to be edited to use ${ITK_LIBRARIES} instead of ITKCommon, ITKIO, ITKBasicFilter.... etc, otherwise you will get errors like "Cannot open file: ITKCommon.lib"
 
 
See [[FARSIGHT_Tutorials/Building_Software]] if you'd like to enable Python wrapping for ITK.
 
 
=== Build VTK ===
 
  
# Download the source code from the [http://vtk.org/VTK/resources/software.html VTK download page]
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FARSIGHT's Git Repository is located at:
#*(Alternatively, you can access the latest development version of VTK using git.  This will allow you to use some additional Qt views in FARSIGHT, but the git version of VTK is less stable than the latest release.  Instructions on how to access the VTK git repository are on the same VTK download page linked above.) [[Image: downloadVTK.jpg|center|frame|[http://vtk.org/VTK/resources/software.html VTK download page]]]
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# Create a VTK folder and extract the VTK zip file into it.
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# Run CMake.
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# <tt>Configure</tt>
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# Specify the generator for this project: <tt>Visual Studio 9 2008 Win64</tt>
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# (optional) For speed optimization in Visual Studio, append <tt>/MP16</tt> to CMAKE_C_FLAGS and CMAKE_CXX_FLAGS as shown in the figure to the right. [[Image: CMAKEVTK.jpg|right|thumb|Multicore building VTK]]
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# Turn OFF the following options:
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#*BUILD_DOCUMENTATION
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#*BUILD_EXAMPLES
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#*BUILD_SHARED_LIBS
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#*BUILD_TESTING
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# Turn ON the following options:
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#*VTK_USE_BOOST
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#*VTK_USE_GUISUPPORT
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#*VTK_USE_QT
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#*VTK_USE_QTCHARTS (only if you are building VTK nightly via GIT)
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# <tt>Configure</tt>
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#*An error may appear about QT_QMAKE_EXECUTABLE not being found. Simply provide the path to qmake.exe (should be <QT root directory>/bin/qmake.exe)
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# <tt>Generate</tt>
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# Go to the VTK binary folder and open the solution file (VTK.sln).
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# Go to the file toolbar: Build->Batch Build  [[Image: batchbuildvxl.jpg|right|thumb|alt=alt text|Batch Build VTK]]
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# Turn ON the following options under ALL_BUILD:
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#*Debug|x64
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#*Release|x64
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#<tt>Build</tt>
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# As you wait, [http://xkcd.com/323/ take a nice long shower.] [http://xkcd.com/303/ Then brush your teeth.]
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== Configure and Build FARSIGHT ==
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https://github.com/RoysamLab/Farsight-toolkit.git
  
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=== Build FARSIGHT ===
  
Run CMake and set your desired modules to ON.  CMake will then tell you if you are missing any libraries.
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FARSIGHT depends on Qt, Boost, ITK, VTK, and VXL.
Some modules need glut. Therefore, set the desired locations properly for:
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GLUT_INCLUDE_DIR, (ex: C:/Program Files/Microsoft Visual Studio 8/VC/PlatformSDK/Include/gl)
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and GLUT_glut_LIBRARY (ex: C:/Program Files/Microsoft Visual Studio 8/VC/PlatformSDK/Include/gl/glut32.lib)
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If FTKImage fails to build, go to:
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FARSIGHT's [[SuperBuild]] system can automatically download & build these dependencies for you.
*properties
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**configuration properties
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***C/C++  and under 'Additional options:' add "/bigobj:
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*THE PACKAGE project does not build automatically, but can be selected and build.
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Please follow the [[ManualBuild|ManualBuild instructions]] if you'd prefer to setup these dependencies by hand.
**It requires some type of platform specific program for creating install packages.
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***Build PACKAGE to create an install file of Farsight.
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Note: If running the executable results in the following error:
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=== What's next? ===
'''''"QtGui4.dll was not found"'''''
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you may need to add the QT bin directory to the system path on your OS.
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==Checking the Quality Dashboard==
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==== Checking the Quality Dashboard ====
 
When you start contributing code you can monitor if code and tests you build are compiling correctly on the dashboard machines here: http://cdash.org/CDash/index.php?project=Farsight
 
When you start contributing code you can monitor if code and tests you build are compiling correctly on the dashboard machines here: http://cdash.org/CDash/index.php?project=Farsight
  
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==== Submitting results to the Dashboard ====
 
You can also submit an [[ Submitting_an_Experimental_Dashboard | experimental build ]] or set up [[ Setting_up_automated_builds | automated builds ]].
 
You can also submit an [[ Submitting_an_Experimental_Dashboard | experimental build ]] or set up [[ Setting_up_automated_builds | automated builds ]].

Latest revision as of 22:42, 5 November 2015

When building FARSIGHT for the first time you will need to set up a development environment. FARSIGHT utilizes several large source libraries so ensure that you have at least 25 GiB of HDD space.

Contents

Choose a Compiler For Your OS

Popular choices are gcc/g++ on Linux, Microsoft Visual Studio 2008/2010 on Windows, and XCode* on Mac OS X.

*To install XCode/gcc on Mac OS X you may need to install the XCode development environment.

Install CMake

CMake is a tool which generates the makefiles under Linux, the Visual Studio Solution files (.sln) under Windows, or the XCode project files (.xcodeproj) under Mac OS X. It aims to allow developers to build their projects across different platforms with a minimum of reconfiguration.

Note: If you want to take advantage of multicore building in Visual Studio, you can append /MP to CMAKE_C_FLAGS and CMAKE_CXX_FLAGS at each CMake configuration screen.

Install Git

  1. Download [Git].
  2. When it ask for "Adjusting your PATH environment: How would you like to use Git from the command line", select: Run Git from the Windows Command Prompt.
  3. When it ask for "Configuring the line ending conversions: How should Git treat line endings in text files", select: Checkout Windows-style, commit Unix-style line endings.
Make sure the 2nd option is selected.Make sure the 1st option is selected.

Download FARSIGHT source code

FARSIGHT's Git Repository is located at:

https://github.com/RoysamLab/Farsight-toolkit.git

Build FARSIGHT

FARSIGHT depends on Qt, Boost, ITK, VTK, and VXL.

FARSIGHT's SuperBuild system can automatically download & build these dependencies for you.

Please follow the ManualBuild instructions if you'd prefer to setup these dependencies by hand.

What's next?

Checking the Quality Dashboard

When you start contributing code you can monitor if code and tests you build are compiling correctly on the dashboard machines here: http://cdash.org/CDash/index.php?project=Farsight

Submitting results to the Dashboard

You can also submit an experimental build or set up automated builds .

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