Open Snake Tracing System
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| − | [[Image:Screenshot2. | + | [[Image:Screenshot2.jpg|thumb|center|1100px| Figure 1: ScreenShot of the Tracing System. 87 microglia cells were traced automatically and are color-coded in the rendering. The feature table shows a set of features for each cell. ]] |
| − | [[Image:Screenshot1. | + | [[Image:Screenshot1.jpg|thumb|center|1100px| Figure 2: ScreenShot of the Tracing System. Close-up view of one microglia cell, the soma/nuclei is segmented automatically.]] |
| − | [[Image:TracingSystem_Screenshot. | + | [[Image:TracingSystem_Screenshot.jpg|thumb|center|1100px| Figure 3: ScreenShot of the Tracing System. Tracing result was produced with 4-D open-curve snake model, which traces the centerline and estimates the radius simultaneously. ]] |
| − | [[Image:OpenSnakeTracing. | + | [[Image:OpenSnakeTracing.jpg|thumb|center|1100px| Figure 4: Tracing and Reconstruction Results of Our System on Different Datasets]] |
Revision as of 23:21, 8 May 2011
Tracing System (under construction)
The code for the basic 3-D open-curve tracing system is now in the SVN. The latest code containing the 4-D open-curve tracing model, microglia processing code, GPU implementations and segmentation code will be released soon. We are working on the user manual for the software system.
File:TracingSystem Screenshot.jpg
Figure 3: ScreenShot of the Tracing System. Tracing result was produced with 4-D open-curve snake model, which traces the centerline and estimates the radius simultaneously.
File:OpenSnakeTracing.jpg
Figure 4: Tracing and Reconstruction Results of Our System on Different Datasets
- Contributors to the Tracing System:
- Yu Wang [1]
- Arunachalam Narayanaswamy
- Charlene Tsai
