FARSIGHT Toolkit
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'''Image Segmentation Library: ''' | '''Image Segmentation Library: ''' | ||
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| + | '''PACE: Pattern Analysis aided Cluster Editing: ''' | ||
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'''Pattern Analysis Library: ''' | '''Pattern Analysis Library: ''' | ||
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| + | '''TissueNets Graph Builder & Query-driven Analyzer: ''' | ||
Revision as of 13:36, 10 April 2009
The FARSIGHT Toolkit is not a single tightly integrated software package. It is an organized collection of software modules for image data handling, pre-processing, segmentation, post-processing, and secondary analysis, as described in the [FARSIGHT Framework]. All of the modules are written in accordance with software practices of the [Insight Toolkit] Community, and are accessible through the Python scripting language. You can create scripts to accomplish sophisticated associative image analysis tasks over multi-dimensional microscopy image data.
The following paragraphs provide an overview of how this toolkit is organized. Follow the links for further details about each module.
BioFormats Module:
Interface to OME Image Database:
Image Pre-processing Library:
Image Segmentation Library:
PACE: Pattern Analysis aided Cluster Editing:
Intrinsic Measurements (object features) Library:
Primary Associative Features Library:
Pattern Analysis Library:
TissueNets Graph Builder & Query-driven Analyzer:
