The Worm Project
From FarsightWiki
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===Binarization=== | ===Binarization=== | ||
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+ | WormBinarization [StringBeforeFilename] [MaskFilename] [StartFrame] [EndFrame][Levell] | ||
See [[WormBinarization]] | See [[WormBinarization]] | ||
Revision as of 14:54, 24 April 2009
The Worm module of FARSIGHT represents a robust multiple worm segmenting and tracking locomotion events in live worm time –lapse sequences in the presence of a pheromone. Worms are tracked according to their distance from the pheromone spots and intrinsic features are computed from the image data for each worm.
Contents |
Executables
Binarization
WormBinarization [StringBeforeFilename] [MaskFilename] [StartFrame] [EndFrame][Levell]
See WormBinarization
Segmentation
Detection
Detect [LabeledImageFilename] [OutputFilename]
Tracking
See Worm Tracker
Behaviors
- Pierce-Shimomura JT, Morse TM, Lockery SR, "The Fundamental Role of Pirouettes in Caenorhabditis elegans Chemotaxis," The Journal of Neuroscience. 1999 Nov; 19(21):9557–9569.